STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACPL_1737Hypothetical protein. (133 aa)    
Predicted Functional Partners:
ACPL_1736
Collagen alpha-5(VI) chain; FOG: Glucan-binding domain (YG repeat).
       0.522
ACPL_7776
yjcG-like uncharacterized protein; 2'-5' RNA ligase.
  
     0.492
whiB-4
Transcriptional regulatory protein WhiB-like WhiB7; Acts as a transcriptional regulator. Probably redox- responsive. The apo- but not holo-form probably binds DNA.
  
     0.485
ACPL_8298
Hypothetical protein.
  
     0.446
ACPL_8043
4-hydroxybenzoate polyprenyltransferase and related prenyltransferases; Belongs to the UbiA prenyltransferase family.
  
     0.432
ACPL_8327
Hypothetical protein; Predicted ATPase.
  
     0.429
ACPL_1742
Ubiquinone/menaquinone biosynthesis methyltransferase ubiE; SAM-dependent methyltransferases.
 
     0.419
ACPL_240
Hypothetical protein.
  
     0.405
Your Current Organism:
Actinoplanes sp. SE50110
NCBI taxonomy Id: 134676
Other names: A. sp. SE50/110, Actinoplanes sp. (strain 50/110), Actinoplanes sp. 50/110, Actinoplanes sp. SE50/110
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.