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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACPL_179Uncharacterized protein conserved in bacteria. (92 aa)    
Predicted Functional Partners:
ACPL_178
Hypothetical protein.
       0.654
gltB
Glutamate synthase domain 2.
       0.601
ACPL_176
Pyridoxamine 5'-phosphate oxidase-related FMN-binding protein.
 
     0.523
dcd
Deoxycytidine triphosphate deaminase; Bifunctional enzyme that catalyzes both the deamination of dCTP to dUTP and the hydrolysis of dUTP to dUMP without releasing the toxic dUTP intermediate.
  
    0.501
ACPL_6130
Glycoside hydrolase family protein; Endoglucanase.
  
     0.469
ACPL_389
Conserved protein containing a Zn-ribbon-like motif, possibly RNA-binding.
  
     0.453
ACPL_3915
Carbohydrate diacid regulator; Regulator of polyketide synthase expression.
  
     0.427
Your Current Organism:
Actinoplanes sp. SE50110
NCBI taxonomy Id: 134676
Other names: A. sp. SE50/110, Actinoplanes sp. (strain 50/110), Actinoplanes sp. 50/110, Actinoplanes sp. SE50/110
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