STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACPL_1800Hypothetical protein. (241 aa)    
Predicted Functional Partners:
nrps2B
2,3-dihydroxybenzoate-AMP ligase; Peptide arylation enzymes.
   
  
 0.807
ACPL_225
Hypothetical protein.
  
     0.707
rpsD
30S ribosomal protein S4; One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the body of the 30S subunit.
       0.611
ACPL_1362
Hypothetical protein.
  
     0.588
ACPL_1222
Hypothetical protein.
  
     0.579
ACPL_7621
Hypothetical protein.
  
     0.568
ACPL_1769
Hypothetical protein.
  
     0.560
ACPL_7221
Hypothetical protein.
  
     0.559
ACPL_8314
Hypothetical protein.
  
     0.542
ACPL_8081
Hypothetical protein.
  
     0.540
Your Current Organism:
Actinoplanes sp. SE50110
NCBI taxonomy Id: 134676
Other names: A. sp. SE50/110, Actinoplanes sp. (strain 50/110), Actinoplanes sp. 50/110, Actinoplanes sp. SE50/110
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.