STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ACPL_181Serine phosphatase RsbU, regulator of sigma subunit. (375 aa)    
Predicted Functional Partners:
ACPL_397
Serine phosphatase RsbU, regulator of sigma subunit.
 
 
 0.848
rsbV-2
Anti-anti-sigma regulatory factor (antagonist of anti-sigma factor); Belongs to the anti-sigma-factor antagonist family.
  
   0.804
rsbV
Anti-anti-sigma regulatory factor (antagonist of anti-sigma factor); Belongs to the anti-sigma-factor antagonist family.
  
   0.784
rsbV-3
Anti-anti-sigma regulatory factor (antagonist of anti-sigma factor); Belongs to the anti-sigma-factor antagonist family.
  
   0.715
ACPL_2479
Nif-specific regulatory protein; Serine phosphatase RsbU, regulator of sigma subunit.
  
     0.681
ACPL_2318
Signal transduction histidine kinase.
 
  
 0.667
barA
Sensory box histidine kinase/response regulator; Signal transduction histidine kinase.
 
  
 0.665
ACPL_486
Putative anti-sigma regulatory factor, serine/threonine protein kinase.
  
   0.661
ACPL_4809
Two-component system sensor protein; Signal transduction histidine kinase.
 
  
 0.659
ACPL_6654
Protein icfG; Serine phosphatase RsbU, regulator of sigma subunit.
  
     0.642
Your Current Organism:
Actinoplanes sp. SE50110
NCBI taxonomy Id: 134676
Other names: A. sp. SE50/110, Actinoplanes sp. (strain 50/110), Actinoplanes sp. 50/110, Actinoplanes sp. SE50/110
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.