STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACPL_1812GCN5-related N-acetyltransferase; Predicted acetyltransferase. (289 aa)    
Predicted Functional Partners:
ACPL_4008
Predicted membrane protein.
  
     0.660
ACPL_3424
Histidine kinase.
  
     0.573
ACPL_6791
Endonuclease/exonuclease/phosphatase; Exonuclease III.
  
     0.555
pclO
Predicted membrane protein.
 
     0.546
ACPL_2142
Uncharacterized protein; Regulator of polyketide synthase expression.
  
     0.540
gltB
Glutamate synthase domain 2.
       0.539
gltD
NADPH-dependent glutamate synthase beta chain and related oxidoreductases.
       0.539
ACPL_608
Histidine kinase.
  
     0.511
ACPL_2326
Hypothetical protein.
  
     0.488
ACPL_6437
Hypothetical protein.
  
     0.477
Your Current Organism:
Actinoplanes sp. SE50110
NCBI taxonomy Id: 134676
Other names: A. sp. SE50/110, Actinoplanes sp. (strain 50/110), Actinoplanes sp. 50/110, Actinoplanes sp. SE50/110
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.