STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACPL_1822Spermidine/putrescine import ATP-binding protein potA; ABC-type sugar transport systems, ATPase components. (289 aa)    
Predicted Functional Partners:
livM
ABC-type branched-chain amino acid transport system, permease component; Belongs to the binding-protein-dependent transport system permease family.
 
 0.999
ACPL_1820
Branched-chain amino acid ABC-type transport system, permease components; Belongs to the binding-protein-dependent transport system permease family.
 
 
 0.996
ACPL_7662
ABC-type branched-chain amino acid transport system, permease component; Belongs to the binding-protein-dependent transport system permease family.
 
 0.990
ACPL_1819
Leu/Ile/Val-binding protein; ABC-type branched-chain amino acid transport systems, periplasmic component.
 
 
 0.988
ACPL_2751
ABC-type branched-chain amino acid transport system, permease component; Belongs to the binding-protein-dependent transport system permease family.
 
 0.985
ACPL_2750
Autoinducer 2 import system permease protein lsrC; Branched-chain amino acid ABC-type transport system, permease components; Belongs to the binding-protein-dependent transport system permease family.
 
 0.983
ACPL_7661
Branched-chain amino acid ABC-type transport system, permease components; Belongs to the binding-protein-dependent transport system permease family.
 
 
 0.982
livK
Leu/Ile/Val-binding protein; ABC-type branched-chain amino acid transport systems, periplasmic component.
 
 
 0.976
ACPL_2747
Leu/Ile/Val-binding-like protein; ABC-type branched-chain amino acid transport systems, periplasmic component.
 
 
 0.934
livF
Phosphate import ATP-binding protein pstB; ABC-type sugar transport systems, ATPase components.
 
  
0.926
Your Current Organism:
Actinoplanes sp. SE50110
NCBI taxonomy Id: 134676
Other names: A. sp. SE50/110, Actinoplanes sp. (strain 50/110), Actinoplanes sp. 50/110, Actinoplanes sp. SE50/110
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.