Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ACPL_1889Transcriptional regulator. (75 aa)    
Predicted Functional Partners:
ACPL_1890
Enoyl-CoA hydratase/carnithine racemase; Belongs to the enoyl-CoA hydratase/isomerase family.
       0.804
ACPL_7213
Uncharacterized protein conserved in bacteria.
  
     0.645
ACPL_7977
Hypothetical protein.
  
     0.593
ACPL_3513
Hypothetical protein.
  
     0.588
ssgB
Sporulation and cell division protein SsgA.
  
   
 0.585
ACPL_1891
Lipid A export ATP-binding/permease protein msbA; ABC-type multidrug transport system, ATPase and permease components.
       0.583
ACPL_8318
Hypothetical protein.
  
     0.560
ACPL_7442
Uncharacterized protein.
  
     0.540
ACPL_805
Uncharacterized protein.
  
     0.515
ACPL_6544
Hypothetical protein.
  
     0.512
Your Current Organism:
Actinoplanes sp. SE50110
NCBI taxonomy Id: 134676
Other names: A. sp. SE50/110, Actinoplanes sp. (strain 50/110), Actinoplanes sp. 50/110, Actinoplanes sp. SE50/110
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