STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACPL_1906Cu/Zn superoxide dismutase. (184 aa)    
Predicted Functional Partners:
ACPL_3713
Cation-transporting ATPase pacS.
   
 0.969
copZ
Cation-transporting ATPase pacS.
   
 0.969
qcrB
Cytochrome b subunit of the bc complex.
    
 
 0.899
qcrA
Putative menaquinol-cytochrome c reductase iron-sulfur subunit; Rieske Fe-S protein.
    
 
 0.880
ACPL_7254
Hypothetical protein.
    
   0.868
ACPL_8044
Regulator of G-protein signaling 12.
    
   0.868
katE
Catalase; Serves to protect cells from the toxic effects of hydrogen peroxide.
  
 0.756
sodF
Superoxide dismutase, Fe-Mn family; Destroys radicals which are normally produced within the cells and which are toxic to biological systems. Belongs to the iron/manganese superoxide dismutase family.
   
 
 0.755
pepP
Xaa-Pro aminopeptidase.
  
 
 0.733
ACPL_280
Superoxide dismutase.
   
 
 0.732
Your Current Organism:
Actinoplanes sp. SE50110
NCBI taxonomy Id: 134676
Other names: A. sp. SE50/110, Actinoplanes sp. (strain 50/110), Actinoplanes sp. 50/110, Actinoplanes sp. SE50/110
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.