Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ACPL_1925Uncharacterized protein. (260 aa)    
Predicted Functional Partners:
ACPL_1924
NTP pyrophosphohydrolases containing a Zn-finger, probably nucleic-acid-binding.
       0.782
ACPL_1042
Hypothetical protein; Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II.
  
     0.714
ACPL_527
Hypothetical protein; DNA or RNA helicases of superfamily II.
  
     0.707
ACPL_1926
Hypothetical protein.
 
     0.703
ACPL_6632
Hypothetical protein.
  
     0.659
ACPL_8300
Hypothetical protein.
  
     0.622
ACPL_7758
Mini-circle putative transposase for IS117.
  
     0.619
ACPL_1679
Hypothetical protein.
  
     0.607
ssgB
Sporulation and cell division protein SsgA.
  
     0.602
ACPL_1364
Collagen alpha-4(VI) chain; Superfamily II DNA and RNA helicases.
  
     0.595
Your Current Organism:
Actinoplanes sp. SE50110
NCBI taxonomy Id: 134676
Other names: A. sp. SE50/110, Actinoplanes sp. (strain 50/110), Actinoplanes sp. 50/110, Actinoplanes sp. SE50/110
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