STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACPL_1928yetK-like uncharacterized transporter; Permeases of the drug/metabolite transporter (DMT) superfamily. (346 aa)    
Predicted Functional Partners:
ACPL_1927
yisV-like uncharacterized HTH-type transcriptional regulator; Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs.
 
   
 0.714
ACPL_4480
Hypothetical protein; Histone acetyltransferase HPA2 and related acetyltransferases.
  
     0.502
ACPL_3915
Carbohydrate diacid regulator; Regulator of polyketide synthase expression.
  
     0.446
ACPL_1028
Anaerobic sulfatase-maturating enzyme; Arylsulfatase regulator (Fe-S oxidoreductase).
  
     0.421
ACPL_4213
Hypothetical protein; FOG: TPR repeat.
  
   0.418
ACPL_7433
Hypothetical protein.
  
     0.412
ACPL_3984
Integral membrane protein.
  
     0.410
ACPL_3990
Hypothetical protein.
  
     0.409
ACPL_4559
Hypothetical protein; Predicted thioesterase.
  
     0.400
Your Current Organism:
Actinoplanes sp. SE50110
NCBI taxonomy Id: 134676
Other names: A. sp. SE50/110, Actinoplanes sp. (strain 50/110), Actinoplanes sp. 50/110, Actinoplanes sp. SE50/110
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.