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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACPL_1937Hypothetical protein. (432 aa)    
Predicted Functional Partners:
murD
UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Cell wall formation. Catalyzes the addition of glutamate to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanine (UMA). Belongs to the MurCDEF family.
  
  0.998
ACPL_1936
Hypothetical protein.
       0.732
ACPL_7758
Mini-circle putative transposase for IS117.
  
     0.681
ACPL_1364
Collagen alpha-4(VI) chain; Superfamily II DNA and RNA helicases.
  
     0.617
ACPL_7643
Hypothetical protein.
  
     0.595
ACPL_720
Protein Daple; Type V secretory pathway, adhesin AidA.
  
     0.593
ACPL_6632
Hypothetical protein.
  
     0.586
ACPL_827
Collagen alpha-4(VI) chain; Serine/threonine protein kinase.
  
     0.580
ACPL_197
Hypothetical protein.
  
     0.573
ACPL_7565
Pentatricopeptide repeat-containing protein; FOG: TPR repeat.
  
     0.568
Your Current Organism:
Actinoplanes sp. SE50110
NCBI taxonomy Id: 134676
Other names: A. sp. SE50/110, Actinoplanes sp. (strain 50/110), Actinoplanes sp. 50/110, Actinoplanes sp. SE50/110
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.