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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACPL_1939Transcriptional regulator, RpiR family; Transcriptional regulators. (349 aa)    
Predicted Functional Partners:
murQ
N-acetylmuramic acid-6-phosphate etherase; Specifically catalyzes the cleavage of the D-lactyl ether substituent of MurNAc 6-phosphate, producing GlcNAc 6-phosphate and D- lactate.
 
  
 0.661
dasA
yurO-like Uncharacterized ABC transporter extracellular-binding protein; ABC-type sugar transport system, periplasmic component.
       0.651
ACPL_1943
yurO-like uncharacterized ABC transporter extracellular-binding protein; ABC-type sugar transport system, periplasmic component.
 
     0.621
nagK
Predicted N-acetylglucosamine kinase.
 
     0.534
ACPL_642
Uncharacterized protein containing SIS (Sugar ISomerase) phosphosugar binding domain.
 
   
 0.496
dasB
ABC-type sugar transport systems, permease components.
       0.490
ACPL_1944
Putative ABC transporter permease protein yurN; ABC-type sugar transport systems, permease components.
 
     0.478
ACPL_1942
Putative ABC transporter permease protein yurM; ABC-type sugar transport system, permease component.
     
 0.474
ACPL_1945
ABC-type sugar transport system, permease component.
 
   
 0.453
ACPL_3199
Maltose-binding periplasmic proteins/domains.
 
     0.404
Your Current Organism:
Actinoplanes sp. SE50110
NCBI taxonomy Id: 134676
Other names: A. sp. SE50/110, Actinoplanes sp. (strain 50/110), Actinoplanes sp. 50/110, Actinoplanes sp. SE50/110
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.