STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACPL_1943yurO-like uncharacterized ABC transporter extracellular-binding protein; ABC-type sugar transport system, periplasmic component. (474 aa)    
Predicted Functional Partners:
ACPL_1944
Putative ABC transporter permease protein yurN; ABC-type sugar transport systems, permease components.
 
 0.987
ACPL_1945
ABC-type sugar transport system, permease component.
 
 0.979
ACPL_3200
ABC-type sugar transport systems, permease components.
 
 0.954
ACPL_3201
ABC-type sugar transport system, permease component.
 
 0.951
ACPL_3199
Maltose-binding periplasmic proteins/domains.
  
  
 
0.909
ACPL_1942
Putative ABC transporter permease protein yurM; ABC-type sugar transport system, permease component.
  
 
 0.818
dasB
ABC-type sugar transport systems, permease components.
  
   0.808
ACPL_642
Uncharacterized protein containing SIS (Sugar ISomerase) phosphosugar binding domain.
 
     0.720
ACPL_1939
Transcriptional regulator, RpiR family; Transcriptional regulators.
 
     0.621
ACPL_1946
DNA polymerase I - 3'-5' exonuclease and polymerase domains.
 
     0.617
Your Current Organism:
Actinoplanes sp. SE50110
NCBI taxonomy Id: 134676
Other names: A. sp. SE50/110, Actinoplanes sp. (strain 50/110), Actinoplanes sp. 50/110, Actinoplanes sp. SE50/110
Server load: medium (44%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.