STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACPL_1968Hypothetical protein. (89 aa)    
Predicted Functional Partners:
ACPL_1969
Predicted membrane protein.
       0.696
ACPL_1967
Protein of unknown function DUF88.
       0.631
ACPL_3895
Putative anti-sigma regulatory factor, serine/threonine protein kinase.
  
    0.546
prsR-3
Anti-sigma F factor; Signal transduction histidine kinase.
  
    0.538
ACPL_3517
Anti-sigma F factor; FOG: PAS/PAC domain.
  
    0.519
ACPL_2384
Sporulation-control protein spo0M; Sporulation control protein.
  
     0.512
ACPL_1970
Hypothetical protein.
       0.487
ACPL_7138
Sporulation-control protein spo0M; Sporulation control protein.
  
     0.469
ACPL_3248
Anti-sigma regulatory factor (Ser/Thr protein kinase).
  
    0.467
egtD
Uncharacterized protein; Catalyzes the SAM-dependent triple methylation of the alpha- amino group of histidine to form hercynine, a step in the biosynthesis pathway of ergothioneine; Belongs to the methyltransferase superfamily. EgtD family.
   
    0.461
Your Current Organism:
Actinoplanes sp. SE50110
NCBI taxonomy Id: 134676
Other names: A. sp. SE50/110, Actinoplanes sp. (strain 50/110), Actinoplanes sp. 50/110, Actinoplanes sp. SE50/110
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.