STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
yurOyurO-like uncharacterized ABC transporter extracellular-binding protein; ABC-type sugar transport system, periplasmic component. (413 aa)    
Predicted Functional Partners:
ACPL_2481
yurO-like uncharacterized ABC transporter extracellular-binding protein; ABC-type sugar transport system, periplasmic component.
  
  
  0.932
ACPL_3870
Uncharacterized protein; ABC-type sugar transport system, periplasmic component.
  
  
  0.925
frlN
ABC-type sugar transport systems, permease components.
 
 
 0.923
ACPL_2430
yurO-like uncharacterized ABC transporter extracellular-binding protein; ABC-type sugar transport system, periplasmic component.
  
  
  0.919
ACPL_6095
yurO-like uncharacterized ABC transporter extracellular-binding protein; ABC-type sugar transport system, periplasmic component.
  
  
  0.918
yurM
Putative ABC transporter permease protein yurM; ABC-type sugar transport system, permease component.
 
 
 0.904
phy
Putative histidine kinase, classic; Osmosensitive K+ channel histidine kinase.
       0.570
ACPL_2007
Hypothetical protein.
 
     0.569
ACPL_5671
ABC-type sugar transport systems, permease components.
 
   0.563
ACPL_5670
ABC-type sugar transport system, permease component.
 
 
 0.550
Your Current Organism:
Actinoplanes sp. SE50110
NCBI taxonomy Id: 134676
Other names: A. sp. SE50/110, Actinoplanes sp. (strain 50/110), Actinoplanes sp. 50/110, Actinoplanes sp. SE50/110
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.