Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
ACPL_2020 | ACPL_2021 | ACPL_2020 | ACPL_2021 | Signal transduction histidine kinase. | Hypothetical protein. | 0.513 |
ACPL_2020 | eshA | ACPL_2020 | ACPL_2022 | Signal transduction histidine kinase. | cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases. | 0.526 |
ACPL_2021 | ACPL_2020 | ACPL_2021 | ACPL_2020 | Hypothetical protein. | Signal transduction histidine kinase. | 0.513 |
ACPL_2021 | ACPL_2023 | ACPL_2021 | ACPL_2023 | Hypothetical protein. | Camphene synthase; Similar to chloroplast protein. | 0.521 |
ACPL_2021 | ACPL_2024 | ACPL_2021 | ACPL_2024 | Hypothetical protein. | SAM-dependent methyltransferases. | 0.504 |
ACPL_2021 | eshA | ACPL_2021 | ACPL_2022 | Hypothetical protein. | cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases. | 0.521 |
ACPL_2023 | ACPL_2021 | ACPL_2023 | ACPL_2021 | Camphene synthase; Similar to chloroplast protein. | Hypothetical protein. | 0.521 |
ACPL_2023 | ACPL_2024 | ACPL_2023 | ACPL_2024 | Camphene synthase; Similar to chloroplast protein. | SAM-dependent methyltransferases. | 0.957 |
ACPL_2023 | eshA | ACPL_2023 | ACPL_2022 | Camphene synthase; Similar to chloroplast protein. | cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases. | 0.859 |
ACPL_2024 | ACPL_2021 | ACPL_2024 | ACPL_2021 | SAM-dependent methyltransferases. | Hypothetical protein. | 0.504 |
ACPL_2024 | ACPL_2023 | ACPL_2024 | ACPL_2023 | SAM-dependent methyltransferases. | Camphene synthase; Similar to chloroplast protein. | 0.957 |
ACPL_2024 | eshA | ACPL_2024 | ACPL_2022 | SAM-dependent methyltransferases. | cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases. | 0.857 |
eshA | ACPL_2020 | ACPL_2022 | ACPL_2020 | cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases. | Signal transduction histidine kinase. | 0.526 |
eshA | ACPL_2021 | ACPL_2022 | ACPL_2021 | cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases. | Hypothetical protein. | 0.521 |
eshA | ACPL_2023 | ACPL_2022 | ACPL_2023 | cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases. | Camphene synthase; Similar to chloroplast protein. | 0.859 |
eshA | ACPL_2024 | ACPL_2022 | ACPL_2024 | cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases. | SAM-dependent methyltransferases. | 0.857 |