STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
nolOCarbamoyltransferase; Predicted carbamoyl transferase, NodU family. (680 aa)    
Predicted Functional Partners:
ACPL_2036
Hypothetical protein.
       0.773
ACPL_2037
Uncharacterized protein conserved in bacteria.
       0.773
nrps1A
Amino acid adenylation domain-containing protein; Non-ribosomal peptide synthetase modules and related proteins.
 
   
 0.738
ACPL_2653
Putative 55.3 kDa protein in thcA 5'region; Glycosyltransferases involved in cell wall biogenesis.
 
    0.727
nrps1B
Non-ribosomal peptide synthetase modules and related proteins.
     
 0.703
baeN
Thiotemplate mechanism natural product synthetase; Non-ribosomal peptide synthetase modules and related proteins.
     
 0.703
dapA
Dihydrodipicolinate synthase/N-acetylneuraminate lyase; Belongs to the DapA family.
       0.701
rfaE
Cytidyltransferase-like protein; Catalyzes the ADP transfer from ATP to D-glycero-beta-D- manno-heptose 1-phosphate, yielding ADP-D-glycero-beta-D-manno-heptose. In the N-terminal section; belongs to the carbohydrate kinase PfkB family.
 
   
 0.640
ACPL_6195
Polyketide synthase modules and related proteins.
     
 0.636
ACPL_2647
ADP-heptose-LPS heptosyltransferase 2; ADP-heptose:LPS heptosyltransferase.
 
  
 0.631
Your Current Organism:
Actinoplanes sp. SE50110
NCBI taxonomy Id: 134676
Other names: A. sp. SE50/110, Actinoplanes sp. (strain 50/110), Actinoplanes sp. 50/110, Actinoplanes sp. SE50/110
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.