STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACPL_2049Cell envelope-related transcriptional attenuator; Transcriptional regulator. (385 aa)    
Predicted Functional Partners:
ACPL_1390
ComE operon protein 1; Transcriptional accessory protein.
 
     0.619
sepF
Cell division protein sepF; Cell division protein that is part of the divisome complex and is recruited early to the Z-ring. Probably stimulates Z-ring formation, perhaps through the cross-linking of FtsZ protofilaments. Its function overlaps with FtsA.
  
   
 0.547
rodA
Bacterial cell division membrane protein; Belongs to the SEDS family.
  
  
 0.490
ACPL_1852
Uncharacterized protein; Required for morphogenesis under gluconeogenic growth conditions; Belongs to the gluconeogenesis factor family.
  
     0.484
ACPL_5806
LexA repressor; SOS-response transcriptional repressors (RecA-mediated autopeptidases).
  
     0.482
amsB
Amylovoran biosynthesis glycosyltransferase amsB; Glycosyltransferases involved in cell wall biogenesis.
     
 0.447
ACPL_2051
Glycosyltransferase.
       0.427
ACPL_1303
Glycosyl transferase family protein; Membrane carboxypeptidase (penicillin-binding protein).
  
    0.420
ACPL_8294
Membrane-bound protein lytR; Transcriptional regulator.
 
   
0.409
ACPL_5319
Membrane-bound protein lytR; Transcriptional regulator.
 
   
0.406
Your Current Organism:
Actinoplanes sp. SE50110
NCBI taxonomy Id: 134676
Other names: A. sp. SE50/110, Actinoplanes sp. (strain 50/110), Actinoplanes sp. 50/110, Actinoplanes sp. SE50/110
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.