STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACPL_2068Hypothetical protein. (134 aa)    
Predicted Functional Partners:
ACPL_2069
Predicted membrane protein/domain.
 
     0.803
ACPL_7314
Histone-lysine N-methyltransferase MLL3.
  
     0.751
ACPL_3629
Hypothetical protein; FOG: WD40 repeat.
  
     0.742
ndhD
NAD(P)H-quinone oxidoreductase chain 4; Similar to chloroplast protein; Membrane protein involved in the export of O-antigen and teichoic acid.
  
     0.742
ACPL_5542
O-antigen polymerase.
  
     0.727
triO
Triple functional domain protein; Type V secretory pathway, adhesin AidA.
  
     0.720
ACPL_5371
Polycystic kidney disease protein 1-like 3; Predicted drug exporters of the RND superfamily.
  
     0.719
ACPL_5641
Putative lipopolysaccharide biosynthesis protein; Lipid A core - O-antigen ligase and related enzymes.
  
     0.708
ACPL_1144
Hypothetical protein.
  
     0.706
ACPL_6941
Uncharacterized protein contain chitin-binding domain type 3.
  
     0.706
Your Current Organism:
Actinoplanes sp. SE50110
NCBI taxonomy Id: 134676
Other names: A. sp. SE50/110, Actinoplanes sp. (strain 50/110), Actinoplanes sp. 50/110, Actinoplanes sp. SE50/110
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.