Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ACPL_2080Hypothetical protein. (165 aa)    
Predicted Functional Partners:
ACPL_2081
Hydrolase; Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily).
 
     0.801
ACPL_2082
Prostaglandin-E(2) 9-reductase; Predicted oxidoreductases (related to aryl-alcohol dehydrogenases).
       0.773
pel
Pectate lyase/Amb allergen; Pectate lyase.
  
     0.587
ACPL_430
Leucine rich repeat variant; Predicted NTPase (NACHT family).
  
     0.557
ACPL_2947
Hypothetical protein.
  
     0.555
ACPL_2083
Helix-turn-helix domain protein; Predicted transcriptional regulators.
       0.549
xlnB
Endo-1,4-beta-xylanase; Belongs to the glycosyl hydrolase 11 (cellulase G) family.
  
     0.514
ACPL_400
Pectate lyase; Alpha-L-arabinofuranosidase.
  
     0.460
ACPL_4965
Hypothetical protein.
  
     0.455
ACPL_3261
Hypothetical protein.
  
     0.448
Your Current Organism:
Actinoplanes sp. SE50110
NCBI taxonomy Id: 134676
Other names: A. sp. SE50/110, Actinoplanes sp. (strain 50/110), Actinoplanes sp. 50/110, Actinoplanes sp. SE50/110
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