STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACPL_2109AAA ATPase central domain protein; ATP-dependent Zn proteases; Belongs to the AAA ATPase family. (790 aa)    
Predicted Functional Partners:
rplQ
Ribosomal protein L17.
   
 
 0.888
rpsI
Ribosomal protein S9; Belongs to the universal ribosomal protein uS9 family.
 
 
 0.887
rpmA
Ribosomal protein L27; Belongs to the bacterial ribosomal protein bL27 family.
  
 
 0.884
rplS
50S ribosomal protein L19; This protein is located at the 30S-50S ribosomal subunit interface and may play a role in the structure and function of the aminoacyl-tRNA binding site.
  
 
 0.872
rpsP
Ribosomal protein S16; Belongs to the bacterial ribosomal protein bS16 family.
  
 
 0.872
rpmJ
50S ribosomal protein L36; Belongs to the bacterial ribosomal protein bL36 family.
   
 
 0.870
rplO
50S ribosomal protein L15; Binds to the 23S rRNA; Belongs to the universal ribosomal protein uL15 family.
   
   0.869
rpmB
50S ribosomal protein L28; Belongs to the bacterial ribosomal protein bL28 family.
    
 
 0.858
ACPL_1931
Uncharacterized protein; Membrane protease subunits, stomatin/prohibitin homologs.
   
 0.835
ACPL_2110
Hypothetical protein.
       0.835
Your Current Organism:
Actinoplanes sp. SE50110
NCBI taxonomy Id: 134676
Other names: A. sp. SE50/110, Actinoplanes sp. (strain 50/110), Actinoplanes sp. 50/110, Actinoplanes sp. SE50/110
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.