STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACPL_211Collagen alpha-6(VI) chain; Type V secretory pathway, adhesin AidA. (585 aa)    
Predicted Functional Partners:
ACPL_2060
Calcineurin-binding protein cabin-1; Serine/threonine protein kinase.
  
  
 0.791
ACPL_6494
Collagen alpha-2(I) chain; Superfamily II DNA and RNA helicases.
  
  
 0.791
ACPL_5297
Polycystic kidney disease protein 1-like 3.
 
     0.764
ACPL_2333
Cell surface glycoprotein 1; FOG: Glucan-binding domain (YG repeat).
  
     0.757
ACPL_1049
Protein piccolo; DNA segregation ATPase FtsK/SpoIIIE and related proteins.
  
  
 0.756
ACPL_2000
Triple functional domain protein; Myosin heavy chain.
  
     0.753
g7c
Protein G7c.
  
     0.731
ACPL_2052
Collagen alpha-5(VI) chain; Transcription-repair coupling factor (superfamily II helicase).
  
     0.718
hgpB
Hemoglobin and hemoglobin-haptoglobin-binding protein B; Type V secretory pathway, adhesin AidA.
  
     0.687
ACPL_6096
Nucleoporin; PPE-repeat proteins.
  
     0.675
Your Current Organism:
Actinoplanes sp. SE50110
NCBI taxonomy Id: 134676
Other names: A. sp. SE50/110, Actinoplanes sp. (strain 50/110), Actinoplanes sp. 50/110, Actinoplanes sp. SE50/110
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.