STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
bfdBFD domain-containing protein (2Fe-2S)-binding domain-containing protein. (63 aa)    
Predicted Functional Partners:
gltB
Glutamate synthase domain 2.
  
  
 0.784
bfrA
Bacterioferritin; Iron-storage protein, whose ferroxidase center binds Fe(2+) ions, oxidizes them by dioxygen to Fe(3+), and participates in the subsequent Fe(3+) oxide mineral core formation within the central cavity of the protein complex; Belongs to the bacterioferritin family.
     
 0.720
ACPL_7253
Rieske (2Fe-2S) domain-containing protein; Predicted Zn-dependent hydrolases of the beta-lactamase fold.
  
 
 0.628
ACPL_1849
Cytochrome b6-f complex iron-sulfur subunit; Rieske Fe-S protein.
  
 
 0.627
bedB
Benzene 1,2-dioxygenase system ferredoxin subunit; Ferredoxin subunits of nitrite reductase and ring-hydroxylating dioxygenases.
  
 
 0.627
cao
Ferredoxin subunits of nitrite reductase and ring-hydroxylating dioxygenases.
  
 
 0.627
ACPL_2660
Similar to mitochondrial Cytochrome b-c1 complex subunit Rieske; Ferredoxin subunits of nitrite reductase and ring-hydroxylating dioxygenases.
  
 
 0.627
ACPL_2665
Uncharacterized hemerythrin-like protein.
  
 
 0.627
ACPL_4992
Hypothetical protein.
  
 
 0.627
cysG
uroporphyrin-III C-methyltransferase / precorrin-2 dehydrogenase / sirohydrochlorin ferrochelatase; Uroporphyrinogen-III methylase.
  
  
 0.607
Your Current Organism:
Actinoplanes sp. SE50110
NCBI taxonomy Id: 134676
Other names: A. sp. SE50/110, Actinoplanes sp. (strain 50/110), Actinoplanes sp. 50/110, Actinoplanes sp. SE50/110
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.