STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
xylRPutative xylose repressor; Transcriptional regulator/sugar kinase. (387 aa)    
Predicted Functional Partners:
ACPL_2156
ATPase BadF/BadG/BcrA/BcrD type; Predicted N-acetylglucosamine kinase.
 
   
 0.781
ACPL_2152
Maltotriose-binding protein; ABC-type sugar transport system, periplasmic component.
 
    0.752
ACPL_2155
6-phospho-beta-glucosidase; Alpha-galactosidases/6-phospho-beta- glucosidases, family 4 of glycosyl hydrolases.
 
   
 0.741
xylR-3
Putative xylose repressor; Transcriptional regulator/sugar kinase.
  
    0.729
ACPL_3654
Glucokinase; Transcriptional regulator/sugar kinase.
  
    0.727
ACPL_7998
Glucokinase; Transcriptional regulator/sugar kinase.
  
     0.716
ACPL_861
Xylose repressor; Transcriptional regulator/sugar kinase.
  
     0.714
ACPL_3627
Transcriptional regulator/sugar kinase.
  
    0.696
ACPL_1674
Glucokinase; Transcriptional regulator/sugar kinase.
  
     0.691
ACPL_2153
ABC-type sugar transport systems, permease components.
       0.675
Your Current Organism:
Actinoplanes sp. SE50110
NCBI taxonomy Id: 134676
Other names: A. sp. SE50/110, Actinoplanes sp. (strain 50/110), Actinoplanes sp. 50/110, Actinoplanes sp. SE50/110
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.