STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
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Gene Fusion
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Coexpression
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[Homology]
Score
ACPL_2191Periplasmic oligopeptide-binding protein; ABC-type dipeptide transport system, periplasmic component. (570 aa)    
Predicted Functional Partners:
oppB
ABC-type dipeptide/oligopeptide/nickel transport systems, permease components.
 
 0.992
oppD
Glutathione import ATP-binding protein gsiA; ATPase components of various ABC-type transport systems, contain duplicated ATPase; Belongs to the ABC transporter superfamily.
 
 0.992
oppC
ABC-type dipeptide/oligopeptide/nickel transport systems, permease components.
 
 0.991
ACPL_6678
Methionine import ATP-binding protein metN; ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component; Belongs to the ABC transporter superfamily.
  
 0.907
ACPL_882
Peptide/nickel transport system substrate-binding protein; ABC-type dipeptide transport system, periplasmic component.
 
 
 0.877
ACPL_1428
Ribose import ATP-binding protein rbsA; ATPase components of various ABC-type transport systems, contain duplicated ATPase.
  
 0.839
uspC
uspC-like extracellular binding protein; ABC-type sugar transport system, periplasmic component.
  
  
 0.821
ACPL_5610
Putative D,D-dipeptide transport system permease protein ddpB; ABC-type dipeptide/oligopeptide/nickel transport systems, permease components.
 
 0.816
ACPL_5611
ABC-type dipeptide/oligopeptide/nickel transport systems, permease components.
 
 0.816
appC
ABC-type dipeptide/oligopeptide/nickel transport systems, permease components.
 
 0.814
Your Current Organism:
Actinoplanes sp. SE50110
NCBI taxonomy Id: 134676
Other names: A. sp. SE50/110, Actinoplanes sp. (strain 50/110), Actinoplanes sp. 50/110, Actinoplanes sp. SE50/110
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.