Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
ACPL_224Hypothetical protein. (185 aa)    
Predicted Functional Partners:
ACPL_934
Septum formation initiator protein.
   
 0.881
cphA
Cyanophycin synthetase; D-alanine-D-alanine ligase and related ATP-grasp enzymes.
  
  
 0.875
mutL
Methylaspartate mutase.
  
 0.873
rodA
Bacterial cell division membrane protein; Belongs to the SEDS family.
  
 0.866
ftsW
Bacterial cell division membrane protein; Belongs to the SEDS family.
  
 0.866
murD
UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Cell wall formation. Catalyzes the addition of glutamate to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanine (UMA). Belongs to the MurCDEF family.
  
  
 0.804
murC
UDP-N-acetylmuramate-alanine ligase; Cell wall formation; Belongs to the MurCDEF family.
  
  
 0.770
pbpA
Peptidoglycan glycosyltransferase; Cell division protein FtsI/penicillin-binding protein 2.
  
 0.766
ftsI
Cell division protein FtsI/penicillin-binding protein 2.
  
 0.766
ACPL_7411
Cell division protein FtsI/penicillin-binding protein 2.
  
 0.766
Your Current Organism:
Actinoplanes sp. SE50110
NCBI taxonomy Id: 134676
Other names: A. sp. SE50/110, Actinoplanes sp. (strain 50/110), Actinoplanes sp. 50/110, Actinoplanes sp. SE50/110
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