STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ACPL_2250ANTAR domain protein with unknown sensor. (244 aa)    
Predicted Functional Partners:
ACPL_1275
ANTAR domain protein with unknown sensor.
 
     0.761
ACPL_5466
ANTAR domain protein with unknown sensor; Signal transduction protein containing GAF and PtsI domains.
  
     0.758
cheB
Two-component system, chemotaxis family, response regulator CheB; Chemotaxis response regulator containing a CheY-like receiver domain and a methylesterase domain.
     
 0.739
ACPL_2251
Hypothetical protein.
       0.727
ACPL_2252
Hypothetical protein.
       0.727
gltB
Glutamate synthase domain 2.
  
  
 0.617
ACPL_4809
Two-component system sensor protein; Signal transduction histidine kinase.
  
  
 0.576
ACPL_1302
Hypothetical protein.
  
     0.492
ACPL_6357
Polycystic kidney disease protein 1-like 3; Cation/multidrug efflux pump.
 
    0.467
ACPL_2254
Hypothetical protein.
       0.459
Your Current Organism:
Actinoplanes sp. SE50110
NCBI taxonomy Id: 134676
Other names: A. sp. SE50/110, Actinoplanes sp. (strain 50/110), Actinoplanes sp. 50/110, Actinoplanes sp. SE50/110
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