STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACPL_2262y4bA/y4pH-like uncharacterized protein; Site-specific recombinases, DNA invertase Pin homologs. (316 aa)    
Predicted Functional Partners:
ACPL_2246
Recombinase.
 
      0.550
ACPL_5159
Mini-circle putative transposase for IS117.
  
     0.550
ACPL_5887
Hypothetical protein.
  
     0.526
xerD-4
Tyrosine recombinase xerD; Integrase; Belongs to the 'phage' integrase family.
 
  
 0.426
ACPL_3498
Uncharacterized protein; Type IV secretory pathway, VirB4 components.
 
    0.408
Your Current Organism:
Actinoplanes sp. SE50110
NCBI taxonomy Id: 134676
Other names: A. sp. SE50/110, Actinoplanes sp. (strain 50/110), Actinoplanes sp. 50/110, Actinoplanes sp. SE50/110
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.