STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
yjdFyjdF-like uncharacterized protein. (128 aa)    
Predicted Functional Partners:
pyrR
Pyrimidine operon attenuation protein / uracil phosphoribosyltransferase; Also displays a weak uracil phosphoribosyltransferase activity which is not physiologically significant.
      
 0.583
panB
3-methyl-2-oxobutanoate hydroxymethyltransferase; Catalyzes the reversible reaction in which hydroxymethyl group from 5,10-methylenetetrahydrofolate is transferred onto alpha- ketoisovalerate to form ketopantoate; Belongs to the PanB family.
      
 0.580
ACPL_2294
Mini-circle uncharacterized 19.1 kDa protein.
       0.449
ACPL_1507
Multidrug-efflux transporter 1 regulator; Predicted transcriptional regulators.
 
     0.448
ACPL_3836
Multidrug-efflux transporter 1 regulator; Predicted transcriptional regulators.
 
     0.426
ACPL_5262
Putative aminopeptidase ybaC; Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily).
  
     0.421
ACPL_1178
Glucosamine-fructose-6-phosphate aminotransferase; Isomerizing; Transcriptional regulators.
  
     0.400
Your Current Organism:
Actinoplanes sp. SE50110
NCBI taxonomy Id: 134676
Other names: A. sp. SE50/110, Actinoplanes sp. (strain 50/110), Actinoplanes sp. 50/110, Actinoplanes sp. SE50/110
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