STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
fn1Fibronectin; RTX toxins and related Ca2+-binding proteins. (978 aa)    
Predicted Functional Partners:
ACPL_4015
Signal transduction protein; Predicted NTPase (NACHT family).
  
     0.744
ACPL_298
Transposase B; Integrase.
  
     0.557
ACPL_3706
Hypothetical protein.
  
     0.522
cpo
Phosphoesterase, PA-phosphatase related protein; Membrane-associated phospholipid phosphatase.
  
     0.459
ACPL_3795
GCN5-related N-acetyltransferase; Predicted acetyltransferase.
  
    0.443
rhaD
Rhamnulose-1-phosphate aldolase/alcohol dehydrogenase.
  
    0.421
rhaB
Rhamnulokinase; Glycerol kinase.
       0.418
ACPL_2315
Protein of unknown function DUF224 cysteine-rich region domain protein; Fe-S oxidoreductase.
       0.418
ACPL_2316
Iron-sulfur cluster binding protein; Uncharacterized conserved protein containing a ferredoxin-like domain.
       0.418
ACPL_2317
Uncharacterized conserved protein containing a ferredoxin-like domain.
       0.418
Your Current Organism:
Actinoplanes sp. SE50110
NCBI taxonomy Id: 134676
Other names: A. sp. SE50/110, Actinoplanes sp. (strain 50/110), Actinoplanes sp. 50/110, Actinoplanes sp. SE50/110
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.