STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
menCO-succinylbenzoate synthase; Converts 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1- carboxylate (SHCHC) to 2-succinylbenzoate (OSB). (366 aa)    
Predicted Functional Partners:
ACPL_2330
Hypothetical protein.
 
     0.955
ACPL_2331
Putative HTH-type transcriptional regulator; Glucosamine 6-phosphate synthetase, contains amidotransferase and phosphosugar isomerase domains.
 
     0.843
ACPL_2329
Glutamate carboxypeptidase; Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase and related deacylases.
 
   
 0.818
ACPL_1688
Hypothetical protein.
 
     0.795
pcaG
Protocatechuate 3,4-dioxygenase beta subunit.
  
  
 0.694
ACPL_2757
Catechol 1,2-dioxygenase; Protocatechuate 3,4-dioxygenase beta subunit.
  
 
 0.625
ACPL_2333
Cell surface glycoprotein 1; FOG: Glucan-binding domain (YG repeat).
       0.574
cpg2
Glutamate carboxypeptidase; Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase and related deacylases.
 
   
 0.573
ACPL_1985
Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II.
  
 
  0.543
ACPL_1881
Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily).
    
 0.511
Your Current Organism:
Actinoplanes sp. SE50110
NCBI taxonomy Id: 134676
Other names: A. sp. SE50/110, Actinoplanes sp. (strain 50/110), Actinoplanes sp. 50/110, Actinoplanes sp. SE50/110
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.