Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
ACPL_2334Putative WD repeat-containing protein; FOG: WD40 repeat. (1082 aa)    
Predicted Functional Partners:
ACPL_3980
Putative WD repeat-containing protein; FOG: WD40 repeat.
 
  
  0.828
ACPL_5840
Nephrocystin-3; FOG: TPR repeat.
  
 
  0.761
ACPL_3617
Putative WD repeat-containing protein; FOG: WD40 repeat.
  
     0.753
ACPL_6981
Putative ATP/GTP binding protein; FOG: TPR repeat.
  
 
  0.748
ACPL_3728
Nephrocystin-3; FOG: TPR repeat.
  
 
  0.742
ACPL_3321
Tetratricopeptide repeat protein 28; FOG: TPR repeat.
 
 
 0.718
ACPL_6128
Putative WD repeat-containing protein; FOG: WD40 repeat.
  
     0.699
ACPL_2333
Cell surface glycoprotein 1; FOG: Glucan-binding domain (YG repeat).
 
     0.694
ACPL_5267
Hypothetical protein.
    
 0.645
ACPL_3320
Uncharacterized protein conserved in bacteria.
 
 
 0.644
Your Current Organism:
Actinoplanes sp. SE50110
NCBI taxonomy Id: 134676
Other names: A. sp. SE50/110, Actinoplanes sp. (strain 50/110), Actinoplanes sp. 50/110, Actinoplanes sp. SE50/110
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