STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
srlSarcalumenin; Translation initiation factor 2 (IF-2; GTPase). (619 aa)    
Predicted Functional Partners:
ACPL_8035
Transmembrane and TPR repeat-containing protein 4; FOG: TPR repeat.
 
 
   0.774
ACPL_720
Protein Daple; Type V secretory pathway, adhesin AidA.
  
     0.771
ACPL_7758
Mini-circle putative transposase for IS117.
  
     0.768
ACPL_1364
Collagen alpha-4(VI) chain; Superfamily II DNA and RNA helicases.
  
     0.765
ACPL_7255
Protein piccolo.
  
     0.764
ACPL_827
Collagen alpha-4(VI) chain; Serine/threonine protein kinase.
  
     0.763
ACPL_6791
Endonuclease/exonuclease/phosphatase; Exonuclease III.
 
    0.754
ACPL_6632
Hypothetical protein.
  
     0.751
ACPL_8300
Hypothetical protein.
 
    0.745
ACPL_8083
Hypothetical protein.
  
     0.744
Your Current Organism:
Actinoplanes sp. SE50110
NCBI taxonomy Id: 134676
Other names: A. sp. SE50/110, Actinoplanes sp. (strain 50/110), Actinoplanes sp. 50/110, Actinoplanes sp. SE50/110
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.