STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACPL_235Hypothetical protein. (120 aa)    
Predicted Functional Partners:
ACPL_405
Phosphoglycerate mutase; Fructose-2,6-bisphosphatase.
  
     0.727
rbpA-2
Hypothetical protein; Binds to RNA polymerase (RNAP), stimulating transcription from principal, but not alternative sigma factor promoters. Belongs to the RNA polymerase-binding protein RbpA family.
  
     0.690
ACPL_1392
DNA polymerase III, delta subunit.
  
     0.684
ACPL_1633
Uncharacterized protein.
  
     0.677
ACPL_7111
Hypothetical protein.
  
     0.654
ACPL_5070
Predicted transcriptional regulators.
  
    0.652
ACPL_1767
YggT family protein; Predicted integral membrane protein.
  
     0.617
ACPL_7107
Hypothetical protein.
  
     0.595
ACPL_7119
Hypothetical protein.
  
     0.574
ACPL_1519
Hypothetical protein.
  
     0.571
Your Current Organism:
Actinoplanes sp. SE50110
NCBI taxonomy Id: 134676
Other names: A. sp. SE50/110, Actinoplanes sp. (strain 50/110), Actinoplanes sp. 50/110, Actinoplanes sp. SE50/110
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.