Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
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textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Score
ACPL_2350Spermidine/putrescine import ATP-binding protein potA; ABC-type sugar transport systems, ATPase components. (256 aa)    
Predicted Functional Partners:
ACPL_2351
ABC-type nitrate/sulfonate/bicarbonate transport system, permease component.
 
 0.982
ACPL_2352
Putative aliphatic sulfonates transport permease protein ssuC; ABC-type nitrate/sulfonate/bicarbonate transport system, permease component.
 
 0.982
ACPL_2353
Putative aliphatic sulfonates-binding protein; ABC-type nitrate/sulfonate/bicarbonate transport systems, periplasmic components.
 
 0.982
ACPL_2387
Putative aliphatic sulfonates transport permease protein ssuC; ABC-type nitrate/sulfonate/bicarbonate transport system, permease component.
 
 0.889
ACPL_2543
ABC-type nitrate/sulfonate/bicarbonate transport system, permease component.
 
 0.888
ACPL_7620
ABC-type nitrate/sulfonate/bicarbonate transport system, permease component.
 
 0.850
ACPL_7618
Sulfonate/nitrate/taurine transport system substrate-binding protein; ABC-type nitrate/sulfonate/bicarbonate transport systems, periplasmic components.
 
 0.792
ACPL_2385
Nitrate transport ATP-binding protein nrtC; ABC-type nitrate/sulfonate/bicarbonate transport systems, periplasmic components.
 
 0.753
ACPL_7105
Hypothetical protein.
  
 0.676
ACPL_8069
Periplasmic glycine betaine/choline-binding (lipo)protein of an ABC-type transport system (osmoprotectant binding protein).
    
 0.633
Your Current Organism:
Actinoplanes sp. SE50110
NCBI taxonomy Id: 134676
Other names: A. sp. SE50/110, Actinoplanes sp. (strain 50/110), Actinoplanes sp. 50/110, Actinoplanes sp. SE50/110
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