Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
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[Homology]
Score
ACPL_2374Putative membrane protein. (100 aa)    
Predicted Functional Partners:
tesB
Acyl-CoA thioesterase.
     
 0.620
ACPL_2375
Hypothetical protein.
       0.532
ACPL_7956
Fatty acid-binding protein-like protein; May play a role in the intracellular transport of hydrophobic ligands.
      
 0.510
ACPL_7557
Putative lipid kinase yegS-like protein; Sphingosine kinase and enzymes related to eukaryotic diacylglycerol kinase.
      
 0.505
ACPL_2376
Spore germination protein gerE; Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain.
       0.419
Your Current Organism:
Actinoplanes sp. SE50110
NCBI taxonomy Id: 134676
Other names: A. sp. SE50/110, Actinoplanes sp. (strain 50/110), Actinoplanes sp. 50/110, Actinoplanes sp. SE50/110
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