STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACPL_2381Hypothetical protein. (153 aa)    
Predicted Functional Partners:
ACPL_1464
Hypothetical protein.
  
     0.651
ACPL_2380
Nuclease.
       0.631
ACPL_5371
Polycystic kidney disease protein 1-like 3; Predicted drug exporters of the RND superfamily.
  
     0.600
ACPL_3931
GCN5-related N-acetyltransferase; Histone acetyltransferase HPA2 and related acetyltransferases.
  
     0.580
ACPL_6251
L-threonine 3-dehydrogenase; Zn-dependent alcohol dehydrogenases.
  
     0.579
ACPL_575
Liprin-alpha-3.
  
 
   0.547
ACPL_5207
Hypothetical protein.
  
     0.537
ACPL_147
Hypothetical protein.
  
    0.523
mdh
Malate dehydrogenase; Catalyzes the reversible oxidation of malate to oxaloacetate. Belongs to the LDH/MDH superfamily. MDH type 2 family.
  
    0.523
ACPL_3129
Hypothetical protein.
  
     0.521
Your Current Organism:
Actinoplanes sp. SE50110
NCBI taxonomy Id: 134676
Other names: A. sp. SE50/110, Actinoplanes sp. (strain 50/110), Actinoplanes sp. 50/110, Actinoplanes sp. SE50/110
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.