STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACPL_2383Hypothetical protein; Predicted enzyme of the cupin superfamily. (109 aa)    
Predicted Functional Partners:
ACPL_4924
Putative oxidoreductase ordL; Glycine/D-amino acid oxidases (deaminating).
 
    0.672
ACPL_2469
Gamma-glutamylputrescine oxidoreductase; Glycine/D-amino acid oxidases (deaminating).
 
    0.650
ACPL_5436
Putative amidohydrolase ytcJ; Predicted metal-dependent hydrolase with the TIM-barrel fold.
 
     0.567
tetR-11
Tetracycline repressor protein class H; Transcriptional regulator.
  
     0.557
ACPL_2475
Similar to mitochondrial Dimethylglycine dehydrogenase; Glycine/D-amino acid oxidases (deaminating).
 
    0.555
ACPL_2384
Sporulation-control protein spo0M; Sporulation control protein.
       0.551
ACPL_2985
Putrescine importer; Amino acid transporters.
 
     0.436
ACPL_7432
Hypothetical protein.
  
     0.401
Your Current Organism:
Actinoplanes sp. SE50110
NCBI taxonomy Id: 134676
Other names: A. sp. SE50/110, Actinoplanes sp. (strain 50/110), Actinoplanes sp. 50/110, Actinoplanes sp. SE50/110
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.