Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
atsKProbable taurine catabolism dioxygenase. (298 aa)    
Predicted Functional Partners:
baeN
Thiotemplate mechanism natural product synthetase; Non-ribosomal peptide synthetase modules and related proteins.
  
 
 0.962
nrps1A
Amino acid adenylation domain-containing protein; Non-ribosomal peptide synthetase modules and related proteins.
  
 
 0.958
nrps1B
Non-ribosomal peptide synthetase modules and related proteins.
  
 
 0.958
ACPL_2385
Nitrate transport ATP-binding protein nrtC; ABC-type nitrate/sulfonate/bicarbonate transport systems, periplasmic components.
 
  
 0.943
ACPL_4130
Non-ribosomal peptide synthetase modules and related proteins.
 
 
 0.922
tycC
Non-ribosomal peptide synthetase modules and related proteins.
 
 
 0.918
ntaA
Nitrilotriacetate monooxygenase; Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases.
 
 
 0.916
ACPL_6195
Polyketide synthase modules and related proteins.
  
 0.907
ACPL_2387
Putative aliphatic sulfonates transport permease protein ssuC; ABC-type nitrate/sulfonate/bicarbonate transport system, permease component.
 
  
 0.890
ppsC
Non-ribosomal peptide synthetase modules and related proteins.
 
 
 0.879
Your Current Organism:
Actinoplanes sp. SE50110
NCBI taxonomy Id: 134676
Other names: A. sp. SE50/110, Actinoplanes sp. (strain 50/110), Actinoplanes sp. 50/110, Actinoplanes sp. SE50/110
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