STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
atsKProbable taurine catabolism dioxygenase. (298 aa)    
Predicted Functional Partners:
ACPL_2385
Nitrate transport ATP-binding protein nrtC; ABC-type nitrate/sulfonate/bicarbonate transport systems, periplasmic components.
 
  
 0.943
ACPL_2387
Putative aliphatic sulfonates transport permease protein ssuC; ABC-type nitrate/sulfonate/bicarbonate transport system, permease component.
 
  
 0.901
ntaA
Nitrilotriacetate monooxygenase; Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases.
 
    0.880
baeN
Thiotemplate mechanism natural product synthetase; Non-ribosomal peptide synthetase modules and related proteins.
  
  
 0.866
ACPL_2386
Sulfonate/nitrate/taurine transport system ATP-binding protein; ABC-type sugar transport systems, ATPase components.
 
    0.862
nrps1A
Amino acid adenylation domain-containing protein; Non-ribosomal peptide synthetase modules and related proteins.
  
  
 0.820
nrps1B
Non-ribosomal peptide synthetase modules and related proteins.
  
  
 0.820
ACPL_2544
Putative aliphatic sulfonates-binding protein; ABC-type taurine transport system, periplasmic component.
 
  
 0.706
ACPL_4130
Non-ribosomal peptide synthetase modules and related proteins.
 
  
 0.657
tycC
Non-ribosomal peptide synthetase modules and related proteins.
 
  
 0.598
Your Current Organism:
Actinoplanes sp. SE50110
NCBI taxonomy Id: 134676
Other names: A. sp. SE50/110, Actinoplanes sp. (strain 50/110), Actinoplanes sp. 50/110, Actinoplanes sp. SE50/110
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.