STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ntaANitrilotriacetate monooxygenase; Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases. (446 aa)    
Predicted Functional Partners:
ACPL_2385
Nitrate transport ATP-binding protein nrtC; ABC-type nitrate/sulfonate/bicarbonate transport systems, periplasmic components.
 
  
 0.907
atsK
Probable taurine catabolism dioxygenase.
 
    0.880
ACPL_2387
Putative aliphatic sulfonates transport permease protein ssuC; ABC-type nitrate/sulfonate/bicarbonate transport system, permease component.
 
    0.833
ACPL_2386
Sulfonate/nitrate/taurine transport system ATP-binding protein; ABC-type sugar transport systems, ATPase components.
 
  
 0.817
ACPL_6801
FMN-dependent NADH-azoreductase; Predicted flavoprotein.
 
 
 0.767
ssuD-4
Alkanesulfonate monooxygenase; Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases.
  
    0.764
ssuD-2
Alkanesulfonate monooxygenase; Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases.
  
    0.731
ACPL_2825
Hypothetical protein; Acyl-CoA dehydrogenases.
  
    0.630
baeN
Thiotemplate mechanism natural product synthetase; Non-ribosomal peptide synthetase modules and related proteins.
   
 
 0.562
nrps1A
Amino acid adenylation domain-containing protein; Non-ribosomal peptide synthetase modules and related proteins.
   
 
 0.550
Your Current Organism:
Actinoplanes sp. SE50110
NCBI taxonomy Id: 134676
Other names: A. sp. SE50/110, Actinoplanes sp. (strain 50/110), Actinoplanes sp. 50/110, Actinoplanes sp. SE50/110
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