STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACPL_2412Hypothetical protein; 2'-5' RNA ligase. (222 aa)    
Predicted Functional Partners:
ACPL_2413
Putative HAD-hydrolase; Predicted hydrolase (HAD superfamily).
       0.773
ACPL_5751
Protein piccolo.
  
     0.647
ACPL_2414
Ubiquinone/menaquinone biosynthesis methyltransferase ubiE; SAM-dependent methyltransferases.
       0.561
ACPL_4408
Hypothetical protein.
  
   
 0.529
ACPL_2608
Hypothetical protein.
  
     0.501
ACPL_2621
Hypothetical protein.
  
     0.473
ACPL_920
Hypothetical protein; ABC-type transport system involved in multi-copper enzyme maturation, permease component.
  
     0.431
ACPL_4965
Hypothetical protein.
  
     0.416
ACPL_4683
Major facilitator superfamily MFS_1.
  
     0.409
Your Current Organism:
Actinoplanes sp. SE50110
NCBI taxonomy Id: 134676
Other names: A. sp. SE50/110, Actinoplanes sp. (strain 50/110), Actinoplanes sp. 50/110, Actinoplanes sp. SE50/110
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.