STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACPL_2438Putative N-acetylmuramoyl-L-alanine amidase; Putative peptidoglycan-binding domain-containing protein. (152 aa)    
Predicted Functional Partners:
hexA
N-acetyl-beta-hexosaminidase.
     
  0.499
nagA
beta-N-acetylhexosaminidase; Beta-glucosidase-related glycosidases.
     
  0.499
hexA-2
N-acetyl-beta-hexosaminidase.
     
  0.499
ACPL_578
Uncharacterized proteins, homologs of microcin C7 resistance protein MccF.
     
  0.499
nahA
N-acetyl-beta-hexosaminidase.
     
  0.499
ACPL_6569
beta-N-acetylhexosaminidase; Beta-glucosidase-related glycosidases.
     
  0.499
ACPL_7409
beta-N-acetylhexosaminidase; Beta-glucosidase-related glycosidases.
     
  0.499
ACPL_390
Spore cortex-lytic enzyme; Uncharacterized protein conserved in bacteria.
  
     0.495
xpk1
Phosphoketolase.
       0.491
Your Current Organism:
Actinoplanes sp. SE50110
NCBI taxonomy Id: 134676
Other names: A. sp. SE50/110, Actinoplanes sp. (strain 50/110), Actinoplanes sp. 50/110, Actinoplanes sp. SE50/110
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