Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of proteins in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| ACPL_244 | ACPL_246 | ACPL_244 | ACPL_246 | SAM-dependent methyltransferases. | Hypothetical protein. | 0.561 |
| ACPL_244 | ACPL_247 | ACPL_244 | ACPL_247 | SAM-dependent methyltransferases. | Predicted membrane protein. | 0.562 |
| ACPL_244 | kptA | ACPL_244 | ACPL_245 | SAM-dependent methyltransferases. | Putative RNA 2'-phosphotransferase; Removes the 2'-phosphate from RNA via an intermediate in which the phosphate is ADP-ribosylated by NAD followed by a presumed transesterification to release the RNA and generate ADP-ribose 1''-2''- cyclic phosphate (APPR>P). May function as an ADP-ribosylase. | 0.787 |
| ACPL_246 | ACPL_244 | ACPL_246 | ACPL_244 | Hypothetical protein. | SAM-dependent methyltransferases. | 0.561 |
| ACPL_246 | ACPL_247 | ACPL_246 | ACPL_247 | Hypothetical protein. | Predicted membrane protein. | 0.815 |
| ACPL_246 | kptA | ACPL_246 | ACPL_245 | Hypothetical protein. | Putative RNA 2'-phosphotransferase; Removes the 2'-phosphate from RNA via an intermediate in which the phosphate is ADP-ribosylated by NAD followed by a presumed transesterification to release the RNA and generate ADP-ribose 1''-2''- cyclic phosphate (APPR>P). May function as an ADP-ribosylase. | 0.556 |
| ACPL_247 | ACPL_244 | ACPL_247 | ACPL_244 | Predicted membrane protein. | SAM-dependent methyltransferases. | 0.562 |
| ACPL_247 | ACPL_246 | ACPL_247 | ACPL_246 | Predicted membrane protein. | Hypothetical protein. | 0.815 |
| ACPL_247 | kptA | ACPL_247 | ACPL_245 | Predicted membrane protein. | Putative RNA 2'-phosphotransferase; Removes the 2'-phosphate from RNA via an intermediate in which the phosphate is ADP-ribosylated by NAD followed by a presumed transesterification to release the RNA and generate ADP-ribose 1''-2''- cyclic phosphate (APPR>P). May function as an ADP-ribosylase. | 0.553 |
| ACPL_3167 | ACPL_5412 | ACPL_3167 | ACPL_5412 | Uncharacterized protein conserved in bacteria. | Uncharacterized protein conserved in bacteria. | 0.662 |
| ACPL_3167 | ACPL_7943 | ACPL_3167 | ACPL_7943 | Uncharacterized protein conserved in bacteria. | Uncharacterized protein; Predicted phosphatase homologous to the C-terminal domain of histone macroH2A1. | 0.676 |
| ACPL_3167 | kptA | ACPL_3167 | ACPL_245 | Uncharacterized protein conserved in bacteria. | Putative RNA 2'-phosphotransferase; Removes the 2'-phosphate from RNA via an intermediate in which the phosphate is ADP-ribosylated by NAD followed by a presumed transesterification to release the RNA and generate ADP-ribose 1''-2''- cyclic phosphate (APPR>P). May function as an ADP-ribosylase. | 0.519 |
| ACPL_3531 | ACPL_3532 | ACPL_3531 | ACPL_3532 | Hypothetical protein. | Swarming motility protein ybiA; Uncharacterized protein conserved in bacteria. | 0.613 |
| ACPL_3531 | ACPL_5567 | ACPL_3531 | ACPL_5567 | Hypothetical protein. | ADP-ribose 1''-phosphate phosphatase; Predicted phosphatase homologous to the C-terminal domain of histone macroH2A1. | 0.515 |
| ACPL_3531 | ACPL_7943 | ACPL_3531 | ACPL_7943 | Hypothetical protein. | Uncharacterized protein; Predicted phosphatase homologous to the C-terminal domain of histone macroH2A1. | 0.485 |
| ACPL_3531 | kptA | ACPL_3531 | ACPL_245 | Hypothetical protein. | Putative RNA 2'-phosphotransferase; Removes the 2'-phosphate from RNA via an intermediate in which the phosphate is ADP-ribosylated by NAD followed by a presumed transesterification to release the RNA and generate ADP-ribose 1''-2''- cyclic phosphate (APPR>P). May function as an ADP-ribosylase. | 0.480 |
| ACPL_3532 | ACPL_3531 | ACPL_3532 | ACPL_3531 | Swarming motility protein ybiA; Uncharacterized protein conserved in bacteria. | Hypothetical protein. | 0.613 |
| ACPL_3532 | ACPL_5412 | ACPL_3532 | ACPL_5412 | Swarming motility protein ybiA; Uncharacterized protein conserved in bacteria. | Uncharacterized protein conserved in bacteria. | 0.540 |
| ACPL_3532 | kptA | ACPL_3532 | ACPL_245 | Swarming motility protein ybiA; Uncharacterized protein conserved in bacteria. | Putative RNA 2'-phosphotransferase; Removes the 2'-phosphate from RNA via an intermediate in which the phosphate is ADP-ribosylated by NAD followed by a presumed transesterification to release the RNA and generate ADP-ribose 1''-2''- cyclic phosphate (APPR>P). May function as an ADP-ribosylase. | 0.533 |
| ACPL_5412 | ACPL_3167 | ACPL_5412 | ACPL_3167 | Uncharacterized protein conserved in bacteria. | Uncharacterized protein conserved in bacteria. | 0.662 |
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