STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACPL_2457Laminin subunit alpha-2. (286 aa)    
Predicted Functional Partners:
capB
YwsC; UDP-N-acetylmuramyl tripeptide synthase.
 
    0.666
ACPL_3454
Hypothetical protein.
 
     0.624
ACPL_6563
Hypothetical protein.
 
     0.605
ACPL_5847
HtpX-like probable protease; Zn-dependent protease with chaperone function.
  
     0.596
ACPL_3764
Hypothetical protein.
  
     0.580
ACPL_4585
VanZ family protein; Glycopeptide antibiotics resistance protein.
  
     0.563
ACPL_8126
Hypothetical protein.
  
     0.511
ACPL_2196
Transcriptional regulator, MarR family.
  
    0.474
ACPL_6765
Hypothetical protein; Predicted NTPase (NACHT family).
  
     0.448
ACPL_5314
Methionine synthase I, cobalamin-binding domain.
  
     0.439
Your Current Organism:
Actinoplanes sp. SE50110
NCBI taxonomy Id: 134676
Other names: A. sp. SE50/110, Actinoplanes sp. (strain 50/110), Actinoplanes sp. 50/110, Actinoplanes sp. SE50/110
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.