Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
potDSpermidine/putrescine-binding periplasmic protein. (416 aa)    
Predicted Functional Partners:
potI
ABC-type spermidine/putrescine transport system, permease component II.
 0.999
potH
ABC-type spermidine/putrescine transport system, permease component I.
 
 
 0.998
potG
Spermidine/putrescine ABC transporter ATPase subunit; Part of the ABC transporter complex PotABCD involved in spermidine/putrescine import. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. Spermidine/putrescine importer (TC 3.A.1.11.1) family.
 
 0.996
ACPL_2469
Gamma-glutamylputrescine oxidoreductase; Glycine/D-amino acid oxidases (deaminating).
 
   
 0.931
potD-2
Spermidine/putrescine-binding periplasmic protein.
  
  
 
0.901
modC
Molybdate transport system ATP-binding protein; ABC-type sugar transport systems, ATPase components; Belongs to the ABC transporter superfamily.
 
 0.752
ACPL_2475
Similar to mitochondrial Dimethylglycine dehydrogenase; Glycine/D-amino acid oxidases (deaminating).
 
   
 0.724
ACPL_4924
Putative oxidoreductase ordL; Glycine/D-amino acid oxidases (deaminating).
 
   
 0.718
ACPL_5175
Hypothetical protein.
  
 0.711
ACPL_2470
Adenosylmethionine-8-amino-7-oxononanoate aminotransferase; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family.
 
   
 0.696
Your Current Organism:
Actinoplanes sp. SE50110
NCBI taxonomy Id: 134676
Other names: A. sp. SE50/110, Actinoplanes sp. (strain 50/110), Actinoplanes sp. 50/110, Actinoplanes sp. SE50/110
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