STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACPL_2475Similar to mitochondrial Dimethylglycine dehydrogenase; Glycine/D-amino acid oxidases (deaminating). (410 aa)    
Predicted Functional Partners:
ACPL_2476
Transcriptional regulators.
 
     0.911
ACPL_2470
Adenosylmethionine-8-amino-7-oxononanoate aminotransferase; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family.
 
   
 0.869
gabT
4-aminobutyrate aminotransferase / (S)-3-amino-2-methylpropionate transaminase; 4-aminobutyrate aminotransferase and related aminotransferases; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family.
 
  
 0.840
ACPL_2478
NAD-dependent aldehyde dehydrogenases; Belongs to the aldehyde dehydrogenase family.
 
  
 0.804
potH
ABC-type spermidine/putrescine transport system, permease component I.
 
    0.765
potD
Spermidine/putrescine-binding periplasmic protein.
 
   
 0.726
potD-2
Spermidine/putrescine-binding periplasmic protein.
 
   
 0.722
potI
ABC-type spermidine/putrescine transport system, permease component II.
 
     0.689
ACPL_2383
Hypothetical protein; Predicted enzyme of the cupin superfamily.
 
    0.555
ACPL_2479
Nif-specific regulatory protein; Serine phosphatase RsbU, regulator of sigma subunit.
  
    0.539
Your Current Organism:
Actinoplanes sp. SE50110
NCBI taxonomy Id: 134676
Other names: A. sp. SE50/110, Actinoplanes sp. (strain 50/110), Actinoplanes sp. 50/110, Actinoplanes sp. SE50/110
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.