STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACPL_2487Collagen alpha-4(VI) chain; PPE-repeat proteins. (1170 aa)    
Predicted Functional Partners:
ACPL_6740
Methionine import ATP-binding protein metN 1; ABC-type oligopeptide transport system, ATPase component.
 
 
 0.858
ACPL_4847
Chaperone protein clpB; Predicted ATPase.
  
     0.764
ACPL_7314
Histone-lysine N-methyltransferase MLL3.
  
     0.753
ndhD
NAD(P)H-quinone oxidoreductase chain 4; Similar to chloroplast protein; Membrane protein involved in the export of O-antigen and teichoic acid.
  
     0.750
ACPL_5542
O-antigen polymerase.
  
     0.742
ACPL_1464
Hypothetical protein.
  
     0.738
triO
Triple functional domain protein; Type V secretory pathway, adhesin AidA.
  
 
   0.730
ACPL_6509
Hypothetical protein.
  
     0.728
ACPL_5371
Polycystic kidney disease protein 1-like 3; Predicted drug exporters of the RND superfamily.
 
     0.723
ACPL_7717
Halomucin; Type V secretory pathway, adhesin AidA.
 
     0.722
Your Current Organism:
Actinoplanes sp. SE50110
NCBI taxonomy Id: 134676
Other names: A. sp. SE50/110, Actinoplanes sp. (strain 50/110), Actinoplanes sp. 50/110, Actinoplanes sp. SE50/110
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.