STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
mcralpha-methylacyl-CoA racemase; Predicted acyl-CoA transferases/carnitine dehydratase; Belongs to the CoA-transferase III family. (355 aa)    
Predicted Functional Partners:
fadE-3
Acyl-CoA dehydrogenases.
 
 
 0.885
fadB
3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase; 3-hydroxyacyl-CoA dehydrogenase.
  
 
 0.842
fadA
Acetyl-CoA acetyltransferase; Belongs to the thiolase-like superfamily. Thiolase family.
  
  
 0.795
ACPL_7667
Acyl-CoA dehydrogenases.
 
 
 0.638
baeN
Thiotemplate mechanism natural product synthetase; Non-ribosomal peptide synthetase modules and related proteins.
   
 
 0.562
ACPL_7666
Hypothetical protein; Predicted aminoglycoside phosphotransferase.
  
     0.528
ACPL_5524
tRNA uridine 5-carboxymethylaminomethyl modification enzyme mnmG; Predicted flavoprotein involved in K+ transport.
  
     0.495
ACPL_6494
Collagen alpha-2(I) chain; Superfamily II DNA and RNA helicases.
  
     0.447
ACPL_2175
Similar to mitochondrial Short-chain specific acyl-CoA dehydrogenase; Acyl-CoA dehydrogenases.
 
 
 0.421
ilvG
Acetolactate synthase I/II/III large subunit; Thiamine pyrophosphate-requiring enzymes; Belongs to the TPP enzyme family.
 
 
 0.421
Your Current Organism:
Actinoplanes sp. SE50110
NCBI taxonomy Id: 134676
Other names: A. sp. SE50/110, Actinoplanes sp. (strain 50/110), Actinoplanes sp. 50/110, Actinoplanes sp. SE50/110
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.