STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACPL_2536Hypothetical protein. (73 aa)    
Predicted Functional Partners:
ACPL_3489
Hypothetical protein.
  
     0.711
ACPL_2533
DNA-binding protein.
 
     0.525
ACPL_2241
Hypothetical protein.
  
     0.497
ACPL_1265
Hypothetical protein.
  
     0.493
ACPL_2840
Hypothetical protein.
  
     0.482
ACPL_6977
Hypothetical protein.
  
     0.449
ACPL_1089
Hypothetical protein; Predicted transcriptional regulator.
  
     0.438
ACPL_1272
Hypothetical protein.
  
     0.437
ACPL_6955
Hypothetical protein.
  
     0.435
ACPL_734
Major facilitator transporter.
  
     0.424
Your Current Organism:
Actinoplanes sp. SE50110
NCBI taxonomy Id: 134676
Other names: A. sp. SE50/110, Actinoplanes sp. (strain 50/110), Actinoplanes sp. 50/110, Actinoplanes sp. SE50/110
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.