STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ugdUDPglucose 6-dehydrogenase; UDP-N-acetyl-D-mannosaminuronate dehydrogenase. (454 aa)    
Predicted Functional Partners:
gtaB
UTP-glucose-1-phosphate uridylyltransferase; UDP-glucose pyrophosphorylase.
 
 0.967
rfaD
UDP-glucose 4-epimerase; dTDP-D-glucose 4,6-dehydratase.
 
 0.951
ACPL_3132
NAD-dependent epimerase/dehydratase; Nucleoside-diphosphate-sugar epimerases.
  
 0.939
galE-4
NAD-dependent epimerase/dehydratase; Nucleoside-diphosphate-sugar epimerases.
  
 0.936
galE-3
UDP-glucose 4-epimerase; Belongs to the NAD(P)-dependent epimerase/dehydratase family.
  
 
 0.924
udgA
Predicted UDP-glucose 6-dehydrogenase.
  
  
 
0.912
rmlC
dTDP-4-dehydrorhamnose 3,5-epimerase and related enzymes.
  
  
 0.864
galT-2
Galactose-1-phosphate uridylyltransferase.
    
 0.812
ACPL_3227
NAD-dependent epimerase/dehydratase; Nucleoside-diphosphate-sugar epimerases.
 
 
 0.779
ACPL_3097
Glucose-1-phosphate thymidylyltransferase; Catalyzes the formation of dTDP-glucose, from dTTP and glucose 1-phosphate, as well as its pyrophosphorolysis. Belongs to the glucose-1-phosphate thymidylyltransferase family.
  
  
 0.732
Your Current Organism:
Actinoplanes sp. SE50110
NCBI taxonomy Id: 134676
Other names: A. sp. SE50/110, Actinoplanes sp. (strain 50/110), Actinoplanes sp. 50/110, Actinoplanes sp. SE50/110
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.